mRNA Analysis Tools for Two Cohorts:

DEG : Apply custom p-value or FDR cutoff thresholds to dynamically obtain differentially expressed genes using limma.
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Heatmap : Draw a heatmap for a virtual cohort. The individual rectangles in a heat map are scaled with a range of colors proportionate to gene expression values.
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Options for plotting


Volcano Plot : Volcano plots enable quick visual identification of genes with statistical significance (P value) and /or magnitude of change (fold change).
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Options for plotting


GSEA : Run Gene Set Enrichment Analysis (GSEA) to determine whether an a priori defined set of genes shows statistically significant, concordant differences on the molecular mechanisms and biological processes between two cohorts.
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Box Plot : Generate boxplots with jitter for comparing expression of query gene in two cohorts.
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