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Toolbox Menu DMG analysis Co-oncoPlot Lollipop Plot2

Genomic Analysis Tools for comparison of Two Cohorts

DMG analysis : Identify differentially mutated genes between two cohorts with results visualized as a forestplot.

Help

Select two cohorts

Cohort 1 (Required)

Cohort 1 label:

Cohort 2 (Required)

Cohort 2 label:

Options for analysis

P-value

FDR

minMutSamples

Options for plotting

Width

Height

Font size (Gene Name):

Color 1

Color 2

Output RData file

This analysis task includes samples (sample IDs) with the required molecular and/or clinical data from and .

You can download a source file of RData format here.

The analysis parameters and result files are also available in the Analysis History for future visit.

Co-oncoPlot : This tool generates onco-plots for two cohorts, and visualized side by side for better comparison of mutational landscape of two cohorts.

Help

Select two cohorts

Cohort 1 (Required)

Cohort 1 label:

Cohort 2 (Required)

Cohort 2 label:

Options for analysis

Genes

Options for plotting

Width

Height

Font Size (Legend)

Font size (Title)

Font size (Gene Name)

Output RData file

This analysis task includes samples (sample IDs) with the required molecular and/or clinical data from and .

You can download a source file of RData format here.

The analysis parameters and result files are also available in the Analysis History for future visit.

Lollipop Plot2 : This tool illustrates mutation frequency along protein structure of a given gene by a customized lollipop plot for better comparison between two cohorts.

Help

Select two cohorts

Cohort 1

Cohort 1 label

Cohort 2

Cohort 2 label

Options for analysis

Gene

please input a gene symbol

Options for plotting

Width

Height

Output RData file

This analysis task includes samples (sample IDs) with the required molecular and/or clinical data from and .

You can download a source file of RData format here.

The analysis parameters and result files are also available in the Analysis History for future visit.