Virus infection and integration is an important pathogenic risk factor for cancer development, thus virus detection is of direct clinical significance in cancer diagnosis and treatment. Our tool, named VirusFaster, uses the paired-end(PE) sequencing reads and soft-clipped information to identify virus integration sites in human genomes at single nucleotide resolution with only a few minutes.

• VirusFaster can be installed and executed locally, and easily integrated in a cancer NGS data analysis pipeline;
• VirusFaster Web server provides additional functions to annotate and visulize virus break points.